Fusarium wilt race 1, caused by the soil-borne fungus Fusarium oxysporum Schlechtend.: Fr. f. sp. niveum (E.F. Sm.) W.C. Snyder & H.N. Hans (Fon), is a major disease of watermelon (Citrullus lanatus) in the United States and throughout the world. While Fusarium wilt race 1 resistance from chromosome 1 has been incorporated into several watermelon […]
Levi Lab @ USDA-ARS
Amnon Levi is a geneticist and project leader at the USDA-ARS Vegetable research laboratory in Charleston, SC, the CucCAP Watermelon team leader, and a CucCAP Bioinformatics team member. Sandra Branham is a postdoctoral research scientist in the lab.
CucCAP team developed a new database for cucurbit genomics
During the past several years, large amounts of genomic, transcriptomic and genetic data have been accumulated for cucurbits. These data have been extensively used to facilitate cucurbit research and breeding. However, efficient access, and ability to mine and analyze these large-scale datasets pose challenges to researchers, especially those with limited bioinformatics expertise. Therefore, the CucCAP […]
CucCAP Team Presentations at PAGXXVII
The Plant & Animal Genome Conference (PAG) is designed to provide a forum on recent developments and future plans for plant & animal genome projects. Consisting of technical presentations, poster sessions, exhibits and workshops, the conference is an excellent opportunity to exchange ideas and applications on this internationally important project. Members of the CucCAP team […]
CucCAP team presentations at Cucurbitaceae 2018
CucCAP plant breeders, pathologists and genomic scientists will present results of their work with cucurbit breeding lines and disease resistance at Cucurbitaceae 2018. On Wednesday, November 14, Rebecca Grumet will be the keynote speaker in the first genomics session with the presentation, The CucCAP Project: Genomic Tools and Resources to Facilitate Breeding for Disease Resistance […]
Cucurbit Genomics Database (CuGenDB) manuscript published in Nucleic Acids Research
The Cucurbitaceae family (cucurbit) includes several economically important crops, such as melon, cucumber, watermelon, pumpkin, squash and gourds. During the past several years, genomic and genetic data have been rapidly accumulated for cucurbits. Read More
CucCAP researchers develop high-density map and identify QTL for resistance to Fusarium in melon
CucCAP researchers at the U.S. Vegetable Laboratory in Charleston, SC collaborated with the Boyce Thompson Institute in Ithaca, NY to generate the highest density genetic map to date for melon.
2018 CucCAP Watermelon Team Annual Report
Progress Reports and Work Plans Watermelon Team members: Amnon Levi (USDA, ARS), Shaker Kousik (USDA, ARS), Kai-shu Ling (USDA, ARS), Cecilia McGregor (Univ. Georgia), Pat Wechter (USDA, ARS), and Todd Wehner (North Carolina St. Univ.) reported on team progress and work plans. Overall objectives: Identifying quantitative trait loci (QTL) associated with resistance to major and emerging diseases, […]
2018 CucCAP Genomics and Bioinformatics Team Annual Report
Progress Reports and Work Plans Team members: Zhangjun Fei (Boyce Thompson Institute); Umesh Reddy (West Virginia St. Univ.); Amnon Levi (USDA, ARS); Yiqun Weng (USDA, ARS); Michael Mazourek (Cornell University); Pat Wechter (USDA, ARS); and Rebecca Grumet (Michigan State University) reported on their lab’s progress and plans. Work in progress and plans 1.1. Develop genomic […]
