The CucCAP team, in collaboration with scientists from around the world, has developed the Cucurbit Genomics Database (CuGenDB), which provides a central portal for the research and breeding community to store, mine, analyze, integrate and disseminate rapidly accumulated genomic and genetic data in cucurbits.
CucCAP Genomics & Bioinformatics Team
Genomics & BioinformaticsTeam contributions to the CucCAP grant including captioned images of research activities, publications available online, and articles about the team’s research efforts and accomplishments.
Cucurbit Genomics Database (CuGenDB) manuscript published in Nucleic Acids Research
The Cucurbitaceae family (cucurbit) includes several economically important crops, such as melon, cucumber, watermelon, pumpkin, squash and gourds. During the past several years, genomic and genetic data have been rapidly accumulated for cucurbits. Read More
2018 CucCAP Genomics and Bioinformatics Team Annual Report
Progress Reports and Work Plans Team members: Zhangjun Fei (Boyce Thompson Institute); Umesh Reddy (West Virginia St. Univ.); Amnon Levi (USDA, ARS); Yiqun Weng (USDA, ARS); Michael Mazourek (Cornell University); Pat Wechter (USDA, ARS); and Rebecca Grumet (Michigan State University) reported on their lab’s progress and plans. Work in progress and plans 1.1. Develop genomic […]
Fei Lab Presents Poster at PAG XXVI
Cucurbita Genome Sequences Provide Insights into Polyploid … Jan 23, 2018 – Cucurbita Genome. Sequences Provide. Insights into Polyploid. Genome Evolution and Heterosis in. Interspecific Hybrid. Outline. Introduction. – The origins and domestication of C. maxima and C. moschata. – The uses of C. maxima …. and C. moschata correlated with heterosis in important agronomic traits.
Fei Lab contributes to CucCAP Genomics and Bioinformatics
Fei Lab Genomic and Bioinformatic accomplishments, March 2017 through November 2017: Publications: 1. Wu S, Shamimuzzaman M, Sun H, Salse J, Sui X, Wilder A, Wu Z, Levi A, Xu Y, Ling KS, Fei Z (2017) The bottle gourd genome provides insights into Cucurbitaceae evolution and facilitates mapping of a Papaya ringspot virus resistance locus. Plant […]
Bottle gourd genome provides insight on evolutionary history and genetic relationships of cucurbit crops – Boyce Thompson Institute
Researchers from the Boyce Thompson Institute (BTI), the United States Department of Agriculture (USDA), and collaborators in China and France have produced the first high-quality genome sequence for the bottle gourd (Lagenaria siceraria) and a reconstructed genome of the most recent Cucurbitaceae ancestor.
Pumpkin genomes sequenced, revealing uncommon history – Vegetable Growers News
Scientists at the Cornell-affiliated Boyce Thompson Institute (BTI) and the National Engineering Research Center for Vegetables in Beijing have sequenced the genomes of two important pumpkin species, Cucurbita maxima and Cucurbita moschata. The finished genomes appear in […] Source: Pumpkin genomes sequenced, revealing uncommon history – Vegetable Growers News
The bottle gourd genome provides insights into Cucurbitaceae evolution and facilitates mapping of a Papaya ring-spot virus resistance locus
The bottle gourd (Lagenaria siceraria cv. USVL1VR-Ls) genomes is published in The Plant Journal and the genome is now available to the public. The bottle gourd genome provides insights into Cucurbitaceae evolution and facilitates mapping of a Papaya ring-spot virus resistance locus
